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Amira Pharmaceuticals connected components tool
Connected Components Tool, supplied by Amira Pharmaceuticals, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/connected+components/connected+components+function+in/pm39344771-284-8-11
Average 90 stars, based on 1 article reviews
connected components tool - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

other:

Article Title: Olivocochlear suppression of outer hair cells in vivo: evidence for combined action of BK and SK2 channels throughout the cochlea.
Article Snippet: Quantification of the numbers or sizes of afferent or efferent terminals or synaptic puncta was based on either two- or three-dimensional (3-D) analysis of confocal z-stacks using Amira (Visualization Sciences Group, Burlington, MA) or Imaris (Bitplane, Saint Paul, MN).

Article Title: Glutamatergic Projections to the Cochlear Nucleus are Redistributed in Tinnitus
Article Snippet: Epithelial whole mounts were slide-mounted using Vectashield (#H-1000, Vector Labs) then imaged at low magnification to create a cochlear frequency map.

Article Title: Allometry in limb regeneration and scale-invariant patterning as the basis of normal morphogenesis from different sizes of blastemas.
Article Snippet: Gene expression domains and GFP signals were extracted using the segmentation tool on Amira.

Article Title: Noise-induced cochlear neuropathy is selective for fibers with low spontaneous rates
Article Snippet: For each stack, presynaptic ribbons and postsynaptic glutamate receptor patches were counted, and their volumes estimated, using the “connected components” tool in Amira.

Article Title: Synergistic transcriptional changes in AMPA and GABA A receptor genes support compensatory plasticity following unilateral hearing loss
Article Snippet: Neighboring DAPI nuclei that were not segregated based on intensity contrast were manually separated using the Volume Edit tool in Amira.

Article Title: Postnatal maturation of auditory-nerve heterogeneity, as seen in spatial gradients of synapse morphology in the inner hair cell area
Article Snippet: Each acquired z-stack is ported into Amira software, where the “connected components” function is used to identify the x,y,z, positions and volumes of every element in 3-D voxel space of at least 10 contiguous pixels and within which all the pixel intensities are greater than 45 on an 8-bit (0-255) scale.

Expressing:

Article Title: Dopaminergic and cholinergic innervation in the mouse cochlea after noise-induced or age-related synaptopathy
Article Snippet: .. For each z-stack, regions of VAT and TH expression were quantified and mapped using the connected components tool in Amira, which identifies, measures, and maps clusters of contiguous voxels that exceed a criterion value in either, or both the TH and VAT channels. ..



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